Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | FCU55_14790 | Not Available | Positive | 3052580 - 3053146 | 21237.2 |
| copper homeostasis protein cutc | FCU55_14795 | Not Available | Positive | 3053160 - 3053906 | 26672.2 |
| cytochrome c | FCU55_14800 | Not Available | Positive | 3054294 - 3055394 | 40299.5 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | FCU55_14805 | Not Available | Positive | 3055419 - 3057848 | 88958.9 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | FCU55_14810 | Not Available | Negative | 3057884 - 3058855 | 37038.7 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | FCU55_14815 | Not Available | Negative | 3058852 - 3059595 | 27792.3 |
| hypothetical protein | FCU55_14820 | Not Available | Negative | 3059636 - 3060031 | 15227.2 |
| duf72 domain-containing protein | FCU55_14825 | Not Available | Negative | 3060084 - 3060854 | 29579.7 |
| duf3596 domain-containing protein | FCU55_14830 | Not Available | Negative | 3060836 - 3062149 | 49412.3 |
| is6-like element is26 family transposase | FCU55_14845 | Not Available | Negative | 3062442 - 3062760 | 13261.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





