Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose abc transporter atp-binding protein arag | FCU55_14685 | Not Available | Positive | 3030253 - 3031767 | 55020.6 |
| l-arabinose abc transporter permease arah | FCU55_14690 | Not Available | Positive | 3031782 - 3032768 | 34227.1 |
| trehalose-phosphatase | FCU55_14695 | Not Available | Positive | 3032935 - 3033735 | 29165.9 |
| alpha,alpha-trehalose-phosphate synthase | FCU55_14700 | Not Available | Positive | 3033710 - 3035134 | 53531.1 |
| universal stress protein uspc | FCU55_14705 | Not Available | Negative | 3035141 - 3035569 | 15642.9 |
| flagellar transcriptional regulator flhd | FCU55_14710 | Not Available | Positive | 3036349 - 3036699 | 13317.2 |
| flagellar transcriptional regulator flhc | FCU55_14715 | Not Available | Positive | 3036702 - 3037280 | 21567.3 |
| flagellar motor stator protein mota | FCU55_14720 | Not Available | Positive | 3037407 - 3038294 | 32013.4 |
| flagellar motor protein motb | FCU55_14725 | Not Available | Positive | 3038291 - 3039217 | 34185.2 |
| chemotaxis protein chea | FCU55_14730 | Not Available | Positive | 3039222 - 3041186 | 71371.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





