Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar type iii secretion system pore protein flip | FCU55_14135 | Not Available | Negative | 2950004 - 2950741 | 26964.1 |
| flagellar type iii secretion system protein flio | FCU55_14140 | Not Available | Negative | 2950741 - 2951106 | 12640.6 |
| flagellar motor switch protein flin | FCU55_14145 | Not Available | Negative | 2951109 - 2951522 | 14831.8 |
| flagellar motor switch protein flim | FCU55_14150 | Not Available | Negative | 2951519 - 2952523 | 37865.5 |
| flagellar basal body-associated protein flil | FCU55_14155 | Not Available | Negative | 2952528 - 2952992 | 17221.8 |
| flagellar hook length control protein flik | FCU55_14160 | Not Available | Negative | 2953097 - 2954224 | 39317.0 |
| flagella biosynthesis chaperone flij | FCU55_14165 | Not Available | Negative | 2954221 - 2954664 | 17325.6 |
| flagellum-specific atp synthase flii | FCU55_14170 | Not Available | Negative | 2954683 - 2956056 | 49317.7 |
| flagellar assembly protein flih | FCU55_14175 | Not Available | Negative | 2956056 - 2956742 | 25013.6 |
| flagellar motor switch protein flig | FCU55_14180 | Not Available | Negative | 2956735 - 2957730 | 36778.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





