Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin synthase | FCU55_13880 | Not Available | Negative | 2902872 - 2903912 | 38650.3 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | FCU55_13885 | Not Available | Positive | 2903999 - 2905288 | 47244.2 |
| kinase inhibitor | FCU55_13890 | Not Available | Positive | 2905347 - 2905823 | 17100.1 |
| putative acyl-coa thioester hydrolase | FCU55_13895 | Not Available | Positive | 2905975 - 2907258 | 46010.6 |
| hydratase | FCU55_13900 | Not Available | Negative | 2907399 - 2909660 | 81409.1 |
| anion permease | FCU55_13905 | Not Available | Negative | 2909843 - 2911276 | 51326.8 |
| 4-oxalomesaconate tautomerase | FCU55_13910 | Not Available | Negative | 2911352 - 2912404 | 37061.7 |
| lysr family transcriptional regulator | FCU55_13915 | Not Available | Positive | 2912588 - 2913541 | 36047.1 |
| 6-phosphogluconolactonase | FCU55_13920 | Not Available | Negative | 2913582 - 2914577 | 36309.6 |
| pyridoxal phosphatase | FCU55_13925 | Not Available | Positive | 2914732 - 2915550 | 30232.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





