Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head completion/stabilization protein | FCU55_21685 | Not Available | Negative | 4408095 - 4408589 | 18345.5 |
| Terminase endonuclease subunit | FCU55_21690 | Not Available | Negative | 4408691 - 4409491 | 28956.6 |
| Major capsid protein, p2 family | FCU55_21695 | Not Available | Negative | 4409537 - 4410589 | 39306.5 |
| Capsid scaffolding protein | FCU55_21700 | Not Available | Negative | 4410613 - 4411449 | 30721.1 |
| Helix-turn-helix domain-containing protein | FCU55_21705 | Not Available | Positive | 4411604 - 4413355 | 66703.3 |
| Pbsx family portal protein | FCU55_21710 | Not Available | Positive | 4413355 - 4414401 | 39275.1 |
| hypothetical protein | FCU55_21715 | Not Available | Negative | 4414416 - 4414940 | 19778.4 |
| duf4760 domain-containing protein | FCU55_21720 | Not Available | Positive | 4415664 - 4416161 | 19385.5 |
| hypothetical protein | FCU55_21725 | Not Available | Positive | 4416201 - 4417043 | 32951.1 |
| Plasmid partitioning/stability family protein | FCU55_21730 | Not Available | Negative | 4417127 - 4417441 | 11939.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





