Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-synthase adenylyltransferase moeb | FCU55_13625 | Not Available | Positive | 2850274 - 2851023 | 26705.5 |
| fructose-6-phosphate aldolase | FCU55_13630 | Not Available | Negative | 2851099 - 2851761 | 23083.3 |
| glycyl-radical enzyme activating protein | FCU55_13635 | Not Available | Positive | 2851892 - 2852791 | 33089.9 |
| glycyl radical protein | FCU55_13640 | Not Available | Positive | 2852797 - 2855229 | 90174.6 |
| sugar-phosphatase ybiv | FCU55_13645 | Not Available | Positive | 2855375 - 2856190 | 30566.8 |
| abc-f family atpase | FCU55_13650 | Not Available | Negative | 2856390 - 2857982 | 59861.4 |
| l,d-transpeptidase | FCU55_13655 | Not Available | Positive | 2858201 - 2859121 | 33327.2 |
| anion transporter | FCU55_13660 | Not Available | Negative | 2859179 - 2860297 | 41068.1 |
| transcriptional regulator mntr | FCU55_13665 | Not Available | Negative | 2860294 - 2860761 | 17641.3 |
| manganase accumulation protein mnts | FCU55_13670 | Not Available | Positive | 2860947 - 2861075 | 5031.31 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





