Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | FCU55_13525 | Not Available | Negative | 2827445 - 2827981 | 20391.7 |
| mfs transporter | FCU55_13530 | Not Available | Positive | 2828065 - 2829273 | 41891.1 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase | FCU55_13535 | Not Available | Positive | 2829273 - 2830088 | 30251.1 |
| hypothetical protein | FCU55_13540 | Not Available | Positive | 2830174 - 2830458 | 9971.24 |
| multidrug efflux mfs transporter mdfa | FCU55_13545 | Not Available | Negative | 2830499 - 2831731 | 44323.7 |
| undecaprenyl-diphosphate phosphatase | FCU55_13550 | Not Available | Positive | 2832016 - 2832612 | 22419.9 |
| dna-binding transcriptional repressor deor | FCU55_13555 | Not Available | Positive | 2832670 - 2833428 | 28563.6 |
| serine-type d-ala-d-ala carboxypeptidase | FCU55_13560 | Not Available | Negative | 2833475 - 2834677 | 43643.4 |
| glutathione s-transferase family protein | FCU55_13565 | Not Available | Positive | 2834924 - 2835550 | 23744.5 |
| pqq-dependent sugar dehydrogenase | FCU55_13570 | Not Available | Negative | 2835547 - 2836662 | 41087.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





