Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal-binding domain-containing protein | FCU55_13425 | Not Available | Negative | 2810733 - 2811056 | 11437.7 |
| lipoprotein | FCU55_13430 | Not Available | Positive | 2811182 - 2811697 | 18911.2 |
| arginine abc transporter atp-binding protein artp | FCU55_13435 | Not Available | Positive | 2811915 - 2812643 | 27023.7 |
| arginine abc transporter substrate-binding protein | FCU55_13440 | Not Available | Positive | 2812661 - 2813392 | 26995.0 |
| arginine abc transporter permease artq | FCU55_13445 | Not Available | Positive | 2813399 - 2814115 | 26218.7 |
| arginine abc transporter permease artm | FCU55_13450 | Not Available | Positive | 2814115 - 2814783 | 24915.3 |
| arginine abc transporter substrate-binding protein | FCU55_13455 | Not Available | Positive | 2815009 - 2815740 | 26857.9 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | FCU55_13460 | Not Available | Negative | 2815769 - 2816896 | 41959.1 |
| duf2593 family protein | FCU55_13465 | Not Available | Negative | 2816937 - 2817425 | 18519.1 |
| putrescine abc transporter permease poti | FCU55_13470 | Not Available | Negative | 2817485 - 2818330 | 30556.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





