Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Baseplate j/gp47 family protein | FCU55_21635 | Not Available | Negative | 4401828 - 4402724 | 31895.8 |
| Lysozyme family baseplate assembly protein | FCU55_21640 | Not Available | Negative | 4402728 - 4403078 | 12905.7 |
| Baseplate assembly protein v | FCU55_21645 | Not Available | Negative | 4403075 - 4403656 | 20206.0 |
| Tail protein | FCU55_21650 | Not Available | Negative | 4403653 - 4404288 | 24747.4 |
| Tail completion protein | FCU55_21655 | Not Available | Negative | 4404281 - 4404748 | 17730.8 |
| Hypothetical protein | FCU55_21660 | Not Available | Negative | 4404772 - 4406649 | 67341.5 |
| Duf2570 domain-containing protein | FCU55_21665 | Not Available | Negative | 4406788 - 4407183 | 14535.1 |
| M15 family metallopeptidase | FCU55_21670 | Not Available | Negative | 4407180 - 4407572 | 14703.4 |
| Holin family protein | FCU55_21675 | Not Available | Negative | 4407569 - 4407892 | 11447.0 |
| Tail protein x | FCU55_21680 | Not Available | Negative | 4407895 - 4408095 | 7479.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





