Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luciferase-like monooxygenase | FCU55_13155 | Not Available | Negative | 2758583 - 2759590 | 37131.5 |
| u32 family peptidase | FCU55_13160 | Not Available | Negative | 2759671 - 2760549 | 32493.0 |
| u32 family peptidase | FCU55_13165 | Not Available | Negative | 2760558 - 2761553 | 37016.1 |
| scp2 domain-containing protein | FCU55_13170 | Not Available | Positive | 2761762 - 2762286 | 19673.0 |
| n-acetyltransferase | FCU55_13175 | Not Available | Positive | 2762280 - 2762783 | 18515.8 |
| dna damage response exodeoxyribonuclease yhbq | FCU55_13180 | Not Available | Negative | 2762770 - 2763072 | 11272.5 |
| hypothetical protein | FCU55_13185 | Not Available | Positive | 2763123 - 2763566 | 16778.2 |
| protein/nucleic acid deglycase | FCU55_13190 | Not Available | Negative | 2763546 - 2764064 | 18815.4 |
| nad-dependent epimerase/dehydratase family protein | FCU55_13195 | Not Available | Positive | 2764192 - 2764827 | 23225.4 |
| permease | FCU55_13200 | Not Available | Positive | 2764900 - 2765940 | 37223.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





