Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | FCU55_13055 | Not Available | Positive | 2735376 - 2736005 | 23336.4 |
| atp-dependent zinc metalloprotease ftsh | FCU55_13060 | Not Available | Positive | 2736105 - 2738039 | 70712.3 |
| dihydropteroate synthase | FCU55_13065 | Not Available | Positive | 2738129 - 2738977 | 30633.0 |
| phosphoglucosamine mutase | FCU55_13070 | Not Available | Positive | 2738970 - 2740307 | 47519.4 |
| preprotein translocase subunit secg | FCU55_13075 | Not Available | Positive | 2740535 - 2740867 | 11365.8 |
| Trna-leu | Not Available | Not Available | Positive | 2740882 - 2740968 | Not Available |
| phosphoethanolamine transferase | FCU55_13085 | Not Available | Positive | 2741425 - 2743050 | 60774.0 |
| argininosuccinate synthase | FCU55_13090 | Not Available | Negative | 2743058 - 2744401 | 49901.3 |
| Trna-met | Not Available | Not Available | Positive | 2744749 - 2744825 | Not Available |
| ribosome maturation factor rimp | FCU55_13100 | Not Available | Positive | 2745032 - 2745484 | 16651.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





