Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoprenoid biosynthesis glyoxalase elbb | FCU55_12905 | Not Available | Positive | 2712722 - 2713375 | 22964.9 |
| monofunctional biosynthetic peptidoglycan transglycosylase | FCU55_12910 | Not Available | Positive | 2713372 - 2714100 | 27341.1 |
| phop regulatory network protein yrbl | FCU55_12915 | Not Available | Negative | 2714097 - 2714729 | 24346.4 |
| pts phosphocarrier protein npr | FCU55_12920 | Not Available | Negative | 2714942 - 2715214 | 9810.71 |
| rnase adapter rapz | FCU55_12925 | Not Available | Negative | 2715211 - 2716065 | 32494.2 |
| pts iia-like nitrogen regulatory protein ptsn | FCU55_12930 | Not Available | Negative | 2716111 - 2716602 | 17934.6 |
| ribosome hibernation promoting factor | FCU55_12935 | Not Available | Negative | 2716720 - 2717007 | 10750.9 |
| rna polymerase factor sigma-54 | FCU55_12940 | Not Available | Negative | 2717030 - 2718463 | 53996.8 |
| lps export abc transporter atp-binding protein | FCU55_12945 | Not Available | Negative | 2718511 - 2719236 | 26802.3 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | FCU55_12950 | Not Available | Negative | 2719243 - 2719800 | 20128.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





