Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Outer membrane protein assembly factor bame | FCU55_20100 | Not Available | Negative | 4088556 - 4088897 | 12302.8 |
| Dna repair protein recn | FCU55_20105 | Not Available | Negative | 4089046 - 4090707 | 61458.1 |
| Dna repair protein recn | FCU55_20110 | Not Available | Negative | 4090793 - 4091671 | 32583.3 |
| Heat shock protein | FCU55_20115 | Not Available | Positive | 4091794 - 4092387 | 21813.1 |
| Hlyc/corc family transporter | FCU55_20120 | Not Available | Negative | 4092441 - 4093727 | 48047.2 |
| Inner membrane protein ypjd | FCU55_20125 | Not Available | Negative | 4093748 - 4094539 | 29312.0 |
| Signal recognition particle protein | FCU55_20130 | Not Available | Positive | 4094706 - 4096067 | 49790.5 |
| Tail fiber protein | FCU55_21625 | Not Available | Negative | 4400348 - 4401302 | 33525.4 |
| Attl | Not Available | Not Available | Positive | 4400968 - 4400980 | Not Available |
| Tail protein i | FCU55_21630 | Not Available | Negative | 4401305 - 4401835 | 19933.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





