Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator fis | FCU55_12655 | Not Available | Negative | 2653343 - 2653639 | 11240.6 |
| trna dihydrouridine synthase dusb | FCU55_12660 | Not Available | Negative | 2653665 - 2654630 | 35868.2 |
| 50s ribosomal protein l11 methyltransferase | FCU55_12665 | Not Available | Negative | 2654959 - 2655840 | 31878.8 |
| sodium/pantothenate symporter | FCU55_12670 | Not Available | Negative | 2655852 - 2657303 | 51734.3 |
| duf997 family protein | FCU55_12675 | Not Available | Negative | 2657293 - 2657535 | 9136.3 |
| sugar kinase | FCU55_12680 | Not Available | Negative | 2657628 - 2658563 | 34200.1 |
| deor/glpr transcriptional regulator | FCU55_12685 | Not Available | Negative | 2658595 - 2659425 | 30482.7 |
| tagatose bisphosphate family class ii aldolase | FCU55_12690 | Not Available | Positive | 2659766 - 2660620 | 31343.5 |
| substrate-binding domain-containing protein | FCU55_12695 | Not Available | Positive | 2660656 - 2661546 | 31115.6 |
| sugar abc transporter atp-binding protein | FCU55_12700 | Not Available | Positive | 2661607 - 2663106 | 55096.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





