Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease v subunit gamma | FCU55_12500 | Not Available | Positive | 2610122 - 2613490 | 128834.0 |
| pitrilysin | FCU55_12505 | Not Available | Positive | 2613666 - 2616554 | 107808.0 |
| exodeoxyribonuclease v subunit beta | FCU55_12510 | Not Available | Positive | 2616547 - 2620089 | 134031.0 |
| exodeoxyribonuclease v subunit alpha | FCU55_12515 | Not Available | Positive | 2620089 - 2621915 | 66705.1 |
| amino-acid n-acetyltransferase | FCU55_12520 | Not Available | Negative | 2621997 - 2623328 | 49228.2 |
| amin domain-containing protein | FCU55_12525 | Not Available | Positive | 2623560 - 2624813 | 45637.1 |
| prd domain-containing protein | FCU55_12530 | Not Available | Positive | 2625071 - 2625895 | 31967.7 |
| pts glucose transporter subunit iibc | FCU55_12535 | Not Available | Positive | 2625927 - 2627507 | 57668.2 |
| putative c-s lyase | FCU55_12540 | Not Available | Positive | 2627507 - 2628682 | 44895.6 |
| sis domain-containing protein | FCU55_12545 | Not Available | Positive | 2628685 - 2629281 | 20884.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





