Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair endonuclease muth | FCU55_12450 | Not Available | Negative | 2602198 - 2602887 | 25515.0 |
| hypothetical protein | FCU55_12455 | Not Available | Negative | 2603066 - 2603260 | 6801.06 |
| rna pyrophosphohydrolase | FCU55_12460 | Not Available | Positive | 2603572 - 2604102 | 20796.0 |
| phosphoenolpyruvate--protein phosphotransferase | FCU55_12465 | Not Available | Positive | 2604115 - 2606361 | 83732.8 |
| prolipoprotein diacylglyceryl transferase | FCU55_12470 | Not Available | Positive | 2606512 - 2607387 | 33109.9 |
| thymidylate synthase | FCU55_12475 | Not Available | Positive | 2607394 - 2608188 | 30481.4 |
| prepilin peptidase-dependent protein | FCU55_12480 | Not Available | Positive | 2608373 - 2608843 | 17935.5 |
| prepilin peptidase-dependent protein | FCU55_12485 | Not Available | Positive | 2608834 - 2609397 | 20413.4 |
| duf2509 family protein | FCU55_12490 | Not Available | Positive | 2609394 - 2609801 | 14938.3 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | FCU55_12495 | Not Available | Positive | 2609786 - 2610109 | 12032.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





