Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar porter family mfs transporter | FCU55_12395 | Not Available | Positive | 2590366 - 2591784 | 51697.7 |
| aspartate/glutamate racemase | FCU55_12400 | Not Available | Positive | 2591913 - 2592605 | 25281.4 |
| lysr family transcriptional regulator | FCU55_12405 | Not Available | Negative | 2592592 - 2593527 | 34424.7 |
| diaminopimelate decarboxylase | FCU55_12410 | Not Available | Positive | 2593649 - 2594911 | 46178.1 |
| hth-type transcriptional regulator galr | FCU55_12415 | Not Available | Negative | 2594918 - 2595949 | 37136.3 |
| bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-acp synthetase | FCU55_12425 | Not Available | Positive | 2596535 - 2598694 | 80786.9 |
| lysophospholipid transporter lplt | FCU55_12430 | Not Available | Positive | 2598687 - 2599880 | 41627.1 |
| nadp(h)-dependent aldo-keto reductase | FCU55_12435 | Not Available | Negative | 2599912 - 2600952 | 38531.7 |
| lipoprotein ygdr | FCU55_12440 | Not Available | Negative | 2601060 - 2601278 | 7877.35 |
| terc family protein | FCU55_12445 | Not Available | Negative | 2601416 - 2602129 | 26159.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





