Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aminohydrolase ssna | FCU55_12295 | Not Available | Negative | 2563831 - 2565159 | 48986.4 |
| putative selenate reductase subunit ygfk | FCU55_12300 | Not Available | Negative | 2565162 - 2568260 | 115693.0 |
| molybdenum cofactor cytidylyltransferase | FCU55_12305 | Not Available | Negative | 2568582 - 2569160 | 21527.2 |
| putative selenium-dependent hydroxylase accessory protein yqec | FCU55_12310 | Not Available | Positive | 2569264 - 2570034 | 28284.3 |
| ef2563 family selenium-dependent molybdenum hydroxylase system protein | FCU55_12315 | Not Available | Positive | 2570082 - 2571707 | 57696.4 |
| carbamate kinase | FCU55_12320 | Not Available | Negative | 2571748 - 2572680 | 33058.0 |
| d-phenylhydantoinase | FCU55_12325 | Not Available | Negative | 2572728 - 2574113 | 50958.1 |
| ygey family selenium metabolism-linked hydrolase | FCU55_12330 | Not Available | Negative | 2574166 - 2575377 | 44806.4 |
| diaminopropionate ammonia-lyase | FCU55_12335 | Not Available | Negative | 2575435 - 2576631 | 43330.1 |
| knotted carbamoyltransferase ygew | FCU55_12340 | Not Available | Negative | 2576689 - 2577876 | 44058.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





