Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound lytic murein transglycosylase mltc | FCU55_11835 | Not Available | Negative | 2476079 - 2477158 | 40114.8 |
| oxidative damage protection protein | FCU55_11840 | Not Available | Negative | 2477223 - 2477498 | 10953.2 |
| a/g-specific adenine glycosylase | FCU55_11845 | Not Available | Negative | 2477526 - 2478578 | 39255.3 |
| trna (guanosine(46)-n7)-methyltransferase trmb | FCU55_11850 | Not Available | Positive | 2478739 - 2479458 | 27308.9 |
| duf469 domain-containing protein | FCU55_11855 | Not Available | Positive | 2479458 - 2479784 | 12823.2 |
| duf2884 family protein | FCU55_11860 | Not Available | Positive | 2479968 - 2480687 | 26430.8 |
| l-asparaginase 2 | FCU55_11865 | Not Available | Positive | 2480863 - 2481909 | 36851.7 |
| duf1202 family protein | FCU55_11870 | Not Available | Positive | 2482026 - 2483033 | 38506.4 |
| trap transporter large permease subunit | FCU55_11875 | Not Available | Negative | 2483089 - 2484390 | 45796.4 |
| trap transporter small permease | FCU55_11880 | Not Available | Negative | 2484390 - 2484893 | 18320.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





