Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU55_11730 | Not Available | Positive | 2454874 - 2455062 | 7266.74 |
| fe-s cluster assembly scaffold sufa | FCU55_11735 | Not Available | Positive | 2455611 - 2455979 | 13314.9 |
| fe-s cluster assembly protein sufb | FCU55_11740 | Not Available | Positive | 2455988 - 2457475 | 54728.1 |
| fe-s cluster assembly atpase sufc | FCU55_11745 | Not Available | Positive | 2457485 - 2458231 | 27633.1 |
| fe-s cluster assembly protein sufd | FCU55_11750 | Not Available | Positive | 2458206 - 2459477 | 46754.4 |
| cysteine desulfurase sufs | FCU55_11755 | Not Available | Positive | 2459474 - 2460694 | 44394.3 |
| cysteine desulfuration protein sufe | FCU55_11760 | Not Available | Positive | 2460707 - 2461123 | 15759.2 |
| l,d-transpeptidase ldte | FCU55_11765 | Not Available | Positive | 2461271 - 2462275 | 36040.4 |
| major outer membrane lipoprotein | FCU55_11770 | Not Available | Negative | 2462338 - 2462574 | 8323.95 |
| pyruvate kinase i | FCU55_11775 | Not Available | Negative | 2462885 - 2464297 | 50732.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





