Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phest operon leader peptide phem | FCU55_11575 | Not Available | Positive | 2420901 - 2421035 | 5335.55 |
| phenylalanine--trna ligase subunit alpha | FCU55_11580 | Not Available | Positive | 2421225 - 2422208 | 36803.9 |
| phenylalanine--trna ligase subunit beta | FCU55_11585 | Not Available | Positive | 2422223 - 2424610 | 87379.2 |
| integration host factor subunit alpha | FCU55_11590 | Not Available | Positive | 2424615 - 2424914 | 11354.6 |
| vitamin b12 abc transporter permease btuc | FCU55_11595 | Not Available | Positive | 2425015 - 2425995 | 34919.4 |
| glutathione peroxidase | FCU55_11600 | Not Available | Positive | 2426058 - 2426609 | 20411.5 |
| vitamin b12 abc transporter atp-binding protein btud | FCU55_11605 | Not Available | Positive | 2426609 - 2427358 | 27114.0 |
| endopeptidase | FCU55_11610 | Not Available | Positive | 2427436 - 2427900 | 17317.8 |
| anti-flhdc factor | FCU55_11615 | Not Available | Positive | 2428148 - 2428861 | 27195.9 |
| ydiu family protein | FCU55_11620 | Not Available | Positive | 2428924 - 2430360 | 54529.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





