Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU55_11520 | Not Available | Positive | 2411811 - 2412347 | 20368.3 |
| fructosamine kinase family protein | FCU55_11525 | Not Available | Negative | 2412388 - 2413248 | 32479.4 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | FCU55_11530 | Not Available | Negative | 2413354 - 2413644 | 10860.6 |
| 6-phosphofructokinase ii | FCU55_11535 | Not Available | Negative | 2413745 - 2414674 | 32480.9 |
| duf481 domain-containing protein | FCU55_11540 | Not Available | Positive | 2414960 - 2415718 | 27599.6 |
| hypothetical protein | FCU55_11545 | Not Available | Negative | 2415771 - 2415878 | 4115.44 |
| threonine--trna ligase | FCU55_11555 | Not Available | Positive | 2417597 - 2419525 | 74004.4 |
| translation initiation factor if-3 | FCU55_11560 | Not Available | Positive | 2419529 - 2420071 | 20565.2 |
| 50s ribosomal protein l35 | FCU55_11565 | Not Available | Positive | 2420168 - 2420365 | 7289.38 |
| 50s ribosomal protein l20 | FCU55_11570 | Not Available | Positive | 2420418 - 2420774 | 13497.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





