Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinylglutamate-semialdehyde dehydrogenase | FCU55_11415 | Not Available | Positive | 2392563 - 2394041 | 53182.5 |
| n-succinylarginine dihydrolase | FCU55_11420 | Not Available | Positive | 2394038 - 2395381 | 49321.5 |
| succinylglutamate desuccinylase | FCU55_11425 | Not Available | Positive | 2395374 - 2396342 | 35857.4 |
| atp-independent periplasmic protein-refolding chaperone | FCU55_11430 | Not Available | Positive | 2396672 - 2397157 | 18173.1 |
| environmental stress-induced protein ves | FCU55_11435 | Not Available | Positive | 2397360 - 2397935 | 21609.1 |
| excinuclease cho | FCU55_11440 | Not Available | Negative | 2397895 - 2398782 | 33683.8 |
| ammonia-dependent nad(+) synthetase | FCU55_11445 | Not Available | Negative | 2399012 - 2399839 | 30668.5 |
| osmotically-inducible lipoprotein osme | FCU55_11450 | Not Available | Positive | 2400041 - 2400379 | 12051.4 |
| hypothetical protein | FCU55_11455 | Not Available | Positive | 2400397 - 2400657 | 9977.2 |
| pts n,n'-diacetylchitobiose transporter subunit iib | FCU55_11460 | Not Available | Positive | 2400678 - 2400998 | 11427.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





