Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | FCU55_11110 | Not Available | Positive | 2335044 - 2336954 | 70414.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | FCU55_11115 | Not Available | Positive | 2337012 - 2337707 | 25163.2 |
| slp family lipoprotein yeay | FCU55_11120 | Not Available | Positive | 2337747 - 2338328 | 20936.4 |
| long-chain-fatty-acid--coa ligase fadd | FCU55_11125 | Not Available | Positive | 2338533 - 2340218 | 62335.7 |
| ribonuclease d | FCU55_11130 | Not Available | Positive | 2340300 - 2341415 | 42184.0 |
| dehydrogenase | FCU55_11135 | Not Available | Negative | 2341505 - 2341675 | 6333.34 |
| leucine efflux protein leue | FCU55_11145 | Not Available | Positive | 2341958 - 2342596 | 23262.0 |
| duf1971 domain-containing protein | FCU55_11150 | Not Available | Positive | 2342769 - 2343128 | 13612.2 |
| duf1869 domain-containing protein | FCU55_11155 | Not Available | Positive | 2343132 - 2343314 | 6608.63 |
| glsb/yeaq/ymge family stress response membrane protein | FCU55_11160 | Not Available | Positive | 2343462 - 2343710 | 8671.14 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





