Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | FCU55_11005 | Not Available | Negative | 2316629 - 2318002 | 48107.7 |
| dna-binding transcriptional regulator kdgr | FCU55_11010 | Not Available | Positive | 2318179 - 2318970 | 30046.2 |
| hypothetical protein | FCU55_11015 | Not Available | Negative | 2319114 - 2319353 | 8514.67 |
| phop/phoq regulator mgrb | FCU55_11020 | Not Available | Positive | 2319512 - 2319655 | 5524.03 |
| hypothetical protein | FCU55_11025 | Not Available | Positive | 2319730 - 2320017 | 10793.1 |
| duf2627 domain-containing protein | FCU55_11030 | Not Available | Positive | 2320687 - 2320830 | 5212.44 |
| transcription antiterminator/rna stability regulator cspe | FCU55_11035 | Not Available | Positive | 2320843 - 2321052 | 7402.76 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | FCU55_11040 | Not Available | Positive | 2321218 - 2322027 | 30547.8 |
| duf986 domain-containing protein | FCU55_11050 | Not Available | Negative | 2323019 - 2323477 | 17616.4 |
| pts mannose transporter subunit iid | FCU55_11055 | Not Available | Negative | 2323532 - 2324383 | 30957.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





