Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-serine/threonine phosphatase | FCU55_10955 | Not Available | Positive | 2305310 - 2305966 | 25326.4 |
| duf1482 family protein | FCU55_10960 | Not Available | Negative | 2305967 - 2306158 | 7324.62 |
| duf1480 family protein | FCU55_10965 | Not Available | Negative | 2306263 - 2306499 | 8753.26 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | FCU55_10970 | Not Available | Negative | 2306616 - 2308055 | 53235.4 |
| mce family protein | FCU55_10975 | Not Available | Negative | 2308135 - 2310768 | 94879.9 |
| paraquat-inducible protein a | FCU55_10980 | Not Available | Negative | 2310737 - 2312020 | 48217.3 |
| gaf domain-containing protein | FCU55_10985 | Not Available | Positive | 2312150 - 2312647 | 18050.5 |
| rna chaperone proq | FCU55_10990 | Not Available | Positive | 2312744 - 2313442 | 25853.9 |
| carboxy terminal-processing peptidase | FCU55_10995 | Not Available | Positive | 2313462 - 2315510 | 76683.3 |
| protease htpx | FCU55_11000 | Not Available | Positive | 2315702 - 2316583 | 31959.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





