Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna damage-inducible protein yebg | FCU55_10905 | Not Available | Positive | 2297533 - 2297823 | 10717.5 |
| protein yebf | FCU55_10910 | Not Available | Positive | 2297890 - 2298246 | 12904.3 |
| tellurite resistance terb family protein | FCU55_10915 | Not Available | Positive | 2298573 - 2299232 | 23844.5 |
| oligopeptidase b | FCU55_10920 | Not Available | Positive | 2299441 - 2301501 | 79387.6 |
| exodeoxyribonuclease x | FCU55_10925 | Not Available | Negative | 2301498 - 2302160 | 25134.5 |
| carbon-nitrogen hydrolase family protein | FCU55_10930 | Not Available | Negative | 2302184 - 2302840 | 24396.4 |
| dna polymerase iii subunit theta | FCU55_10935 | Not Available | Negative | 2302942 - 2303172 | 8846.79 |
| copc domain-containing protein yoba | FCU55_10940 | Not Available | Positive | 2303311 - 2303685 | 13410.9 |
| copper homeostasis membrane protein copd | FCU55_10945 | Not Available | Positive | 2303689 - 2304561 | 32461.2 |
| duf2511 domain-containing protein | FCU55_10950 | Not Available | Positive | 2304574 - 2304915 | 12393.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





