Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Antiterminator protein q | FCU55_19905 | Not Available | Positive | 4054034 - 4054375 | 12657.3 |
| hypothetical protein | FCU55_19910 | Not Available | Negative | 4054388 - 4054936 | 21006.3 |
| hypothetical protein | FCU55_19915 | Not Available | Negative | 4054923 - 4055849 | 35413.2 |
| Hypothetical protein | FCU55_19920 | Not Available | Positive | 4056114 - 4056317 | 7495.28 |
| Putative dna methylase | FCU55_19925 | Not Available | Positive | 4056468 - 4057520 | 40272.1 |
| Putative holin | FCU55_19930 | Not Available | Positive | 4057588 - 4057803 | 7778.49 |
| Lysin | FCU55_19935 | Not Available | Positive | 4057803 - 4058300 | 17986.8 |
| Rz lysis protein | FCU55_19940 | Not Available | Positive | 4058297 - 4058764 | 17007.5 |
| Hypothetical protein | FCU55_19945 | Not Available | Positive | 4058752 - 4058904 | 5782.38 |
| hypothetical | FCU55_19950 | Not Available | Positive | 4058864 - 4058965 | 4000.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





