Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | FCU55_10255 | Not Available | Positive | 2148607 - 2149479 | 32585.2 |
| doxx family protein | FCU55_10260 | Not Available | Negative | 2149527 - 2149949 | 15228.3 |
| 3-phenylpropionate mfs transporter | FCU55_10265 | Not Available | Positive | 2150319 - 2151458 | 41581.1 |
| stationary phase inducible protein csie | FCU55_10270 | Not Available | Negative | 2151450 - 2152730 | 49055.4 |
| alpha/beta hydrolase | FCU55_10275 | Not Available | Negative | 2152921 - 2153775 | 31490.7 |
| inositol-1-monophosphatase | FCU55_10280 | Not Available | Negative | 2153920 - 2154723 | 29173.8 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | FCU55_10285 | Not Available | Positive | 2154842 - 2155582 | 27049.6 |
| fe-s cluster assembly transcriptional regulator iscr | FCU55_10290 | Not Available | Positive | 2155853 - 2156341 | 17337.6 |
| iscs subfamily cysteine desulfurase | FCU55_10295 | Not Available | Positive | 2156453 - 2157667 | 45092.2 |
| fe-s cluster assembly scaffold iscu | FCU55_10300 | Not Available | Positive | 2157695 - 2158081 | 13849.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





