Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator glrr | FCU55_10205 | Not Available | Positive | 2134629 - 2135963 | 49129.2 |
| nitrogen regulatory protein p-ii | FCU55_10210 | Not Available | Positive | 2136024 - 2136362 | 12426.2 |
| no-inducible flavohemoprotein | FCU55_10215 | Not Available | Negative | 2136407 - 2137597 | 43826.0 |
| serine hydroxymethyltransferase | FCU55_10220 | Not Available | Positive | 2137926 - 2139179 | 45319.2 |
| rok family protein | FCU55_10225 | Not Available | Negative | 2139243 - 2140436 | 44537.3 |
| duf5107 domain-containing protein | FCU55_10230 | Not Available | Positive | 2140554 - 2143835 | 123706.0 |
| substrate-binding domain-containing protein | FCU55_10235 | Not Available | Positive | 2143932 - 2144915 | 35133.3 |
| sugar abc transporter atp-binding protein | FCU55_10240 | Not Available | Positive | 2144938 - 2146467 | 55817.8 |
| abc transporter permease | FCU55_10245 | Not Available | Positive | 2146470 - 2147468 | 34516.7 |
| zinc-binding dehydrogenase | FCU55_10250 | Not Available | Positive | 2147534 - 2148595 | 38053.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





