Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holo-acp synthase | FCU55_10155 | Not Available | Positive | 2122416 - 2122796 | 14153.2 |
| type i toxin-antitoxin system toxin shob | FCU55_10160 | Not Available | Positive | 2123217 - 2123297 | 3103.22 |
| 4fe-4s dicluster ferredoxin yfhl | FCU55_10165 | Not Available | Negative | 2123491 - 2123751 | 9862.88 |
| murr/rpir family transcriptional regulator | FCU55_10170 | Not Available | Negative | 2123807 - 2124655 | 30679.3 |
| phosphatidylglycerophosphatase c | FCU55_10175 | Not Available | Positive | 2124864 - 2125499 | 24437.8 |
| trna adenosine(34) deaminase tada | FCU55_10180 | Not Available | Positive | 2125524 - 2126060 | 20071.4 |
| membrane-bound lytic murein transglycosylase mltf | FCU55_10185 | Not Available | Negative | 2126057 - 2127613 | 58291.2 |
| phosphoribosylformylglycinamidine synthase | FCU55_10190 | Not Available | Positive | 2127871 - 2131758 | 141382.0 |
| two component system sensor histidine kinase qsee/glrk | FCU55_10195 | Not Available | Positive | 2132334 - 2133761 | 53324.6 |
| two-component system qseef-associated lipoprotein qseg | FCU55_10200 | Not Available | Positive | 2133926 - 2134639 | 27341.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





