Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoe | FCU55_10105 | Not Available | Positive | 2113402 - 2113977 | 21697.0 |
| anti-sigma-e factor rsea | FCU55_10110 | Not Available | Positive | 2114010 - 2114660 | 24322.8 |
| sigma-e factor regulatory protein rseb | FCU55_10115 | Not Available | Positive | 2114660 - 2115616 | 35777.9 |
| soxr-reducing system protein rsec | FCU55_10120 | Not Available | Positive | 2115613 - 2116092 | 16641.3 |
| elongation factor 4 | FCU55_10125 | Not Available | Positive | 2116290 - 2118089 | 66602.2 |
| signal peptidase i | FCU55_10130 | Not Available | Positive | 2118105 - 2119079 | 35948.3 |
| ribonuclease iii | FCU55_10135 | Not Available | Positive | 2119351 - 2120031 | 25551.6 |
| gtpase era | FCU55_10140 | Not Available | Positive | 2120028 - 2120933 | 33798.1 |
| dna repair protein reco | FCU55_10145 | Not Available | Positive | 2120945 - 2121673 | 27392.2 |
| pyridoxine 5'-phosphate synthase | FCU55_10150 | Not Available | Positive | 2121685 - 2122416 | 26376.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





