Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter subunit mdte | FCU55_10005 | Not Available | Positive | 2089946 - 2091103 | 41162.9 |
| multidrug efflux rnd transporter permease subunit | FCU55_10010 | Not Available | Positive | 2091128 - 2094241 | 111550.0 |
| acid resistance transcriptional activator gadw | FCU55_10015 | Not Available | Negative | 2094604 - 2095332 | 28114.2 |
| acid resistance transcriptional activator gadx | FCU55_10020 | Not Available | Negative | 2095701 - 2096525 | 31308.3 |
| glutamate decarboxylase | FCU55_10025 | Not Available | Negative | 2096893 - 2097450 | 20966.1 |
| alpha-ketoglutarate permease | FCU55_10030 | Not Available | Positive | 2097844 - 2099142 | 47101.3 |
| yfim family lipoprotein | FCU55_10035 | Not Available | Negative | 2099139 - 2099462 | 11881.0 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | FCU55_10040 | Not Available | Negative | 2099508 - 2100863 | 52771.8 |
| protein lysine acetyltransferase | FCU55_10045 | Not Available | Negative | 2100977 - 2103637 | 97892.0 |
| dtw domain-containing protein | FCU55_10050 | Not Available | Negative | 2103669 - 2104367 | 26134.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





