Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione-disulfide reductase | FCU55_09895 | Not Available | Positive | 2072224 - 2073576 | 48755.3 |
| damage inducible protein | FCU55_09900 | Not Available | Negative | 2073630 - 2073713 | 3036.03 |
| arsenate reductase (glutaredoxin) | FCU55_09905 | Not Available | Positive | 2074048 - 2074473 | 15873.2 |
| outer membrane lipoprotein slp | FCU55_09915 | Not Available | Positive | 2075659 - 2076225 | 20949.1 |
| helix-turn-helix transcriptional regulator | FCU55_09920 | Not Available | Positive | 2076378 - 2076908 | 20422.5 |
| hematinate-forming heme oxygenase chus | FCU55_09925 | Not Available | Negative | 2076965 - 2077993 | 38612.8 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | FCU55_09930 | Not Available | Negative | 2078042 - 2080024 | 72491.0 |
| hypothetical protein | FCU55_09935 | Not Available | Positive | 2079930 - 2080121 | 7010.53 |
| hemin abc transporter substrate-binding protein | FCU55_09945 | Not Available | Positive | 2080708 - 2081622 | 32910.2 |
| heme anaerobic degradation radical sam methyltransferase chuw/hutw | FCU55_09950 | Not Available | Positive | 2081642 - 2082979 | 49573.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





