Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | FCU55_09835 | Not Available | Negative | 2059374 - 2060441 | 38732.4 |
| duf2776 family protein | FCU55_09845 | Not Available | Positive | 2061176 - 2062228 | 37792.5 |
| nad(p)/fad-dependent oxidoreductase | FCU55_09850 | Not Available | Negative | 2062315 - 2063508 | 43485.3 |
| low-affinity inorganic phosphate transporter 1 | FCU55_09855 | Not Available | Positive | 2063740 - 2065239 | 53392.4 |
| universal stress protein uspb | FCU55_09860 | Not Available | Negative | 2065310 - 2065645 | 13028.1 |
| universal stress protein uspa | FCU55_09865 | Not Available | Positive | 2066036 - 2066470 | 16067.3 |
| dipeptide/tripeptide permease dtpb | FCU55_09875 | Not Available | Positive | 2066787 - 2068256 | 53541.4 |
| 16s rrna (guanine(1516)-n(2))-methyltransferase rsmj | FCU55_09880 | Not Available | Negative | 2068305 - 2069057 | 26878.7 |
| oligopeptidase a | FCU55_09885 | Not Available | Negative | 2069065 - 2071107 | 77185.3 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | FCU55_09890 | Not Available | Positive | 2071310 - 2072152 | 31973.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





