Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel-responsive transcriptional regulator nikr | FCU55_09785 | Not Available | Positive | 2049209 - 2049610 | 15094.7 |
| gntr family transcriptional regulator | FCU55_09790 | Not Available | Positive | 2049809 - 2050555 | 28407.3 |
| pts sugar transporter subunit iia | FCU55_09795 | Not Available | Positive | 2050580 - 2051053 | 17409.3 |
| pts sugar transporter subunit iib | FCU55_09800 | Not Available | Positive | 2051050 - 2051331 | 9823.0 |
| pts galactitol transporter subunit iic | FCU55_09805 | Not Available | Positive | 2051408 - 2052766 | 48803.4 |
| carbohydrate kinase | FCU55_09810 | Not Available | Positive | 2052759 - 2054267 | 55717.8 |
| hpr family phosphocarrier protein | FCU55_09815 | Not Available | Positive | 2054257 - 2054526 | 9689.66 |
| class ii aldolase | FCU55_09820 | Not Available | Positive | 2054558 - 2055409 | 31033.3 |
| abc-2 transporter permease | FCU55_09825 | Not Available | Negative | 2055518 - 2056642 | 41032.1 |
| ribosome-associated atpase | FCU55_09830 | Not Available | Negative | 2056642 - 2059377 | 100748.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





