Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | FCU55_09635 | Not Available | Negative | 2020883 - 2022199 | 48595.5 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | FCU55_09640 | Not Available | Negative | 2022596 - 2023309 | 26297.9 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | FCU55_09645 | Not Available | Negative | 2023311 - 2024078 | 28458.8 |
| high-affinity branched-chain amino acid abc transporter permease livm | FCU55_09650 | Not Available | Negative | 2024075 - 2025352 | 46272.2 |
| high-affinity branched-chain amino acid abc transporter permease livh | FCU55_09655 | Not Available | Negative | 2025349 - 2026275 | 32966.4 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | FCU55_09660 | Not Available | Negative | 2026323 - 2027432 | 39437.0 |
| aspartate 1-decarboxylase autocleavage activator panm | FCU55_09665 | Not Available | Positive | 2027855 - 2028238 | 14573.4 |
| gnat family n-acetyltransferase | FCU55_09670 | Not Available | Negative | 2028235 - 2028762 | 19674.7 |
| duf1778 domain-containing protein | FCU55_09675 | Not Available | Negative | 2028769 - 2029035 | 9929.96 |
| branched-chain amino acid abc transporter substrate-binding protein | FCU55_09680 | Not Available | Negative | 2029184 - 2030287 | 39064.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





