Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal subunit interface protein | FCU55_09485 | Not Available | Negative | 1986510 - 1986992 | 17467.2 |
| transcriptional regulator | FCU55_09490 | Not Available | Positive | 1986961 - 1987296 | 12577.8 |
| deor/glpr family transcriptional regulator | FCU55_09495 | Not Available | Negative | 1987278 - 1988036 | 28112.7 |
| rhomboid family intramembrane serine protease glpg | FCU55_09500 | Not Available | Negative | 1988053 - 1988883 | 31382.5 |
| thiosulfate sulfurtransferase glpe | FCU55_09505 | Not Available | Negative | 1988928 - 1989254 | 12085.1 |
| glycerol-3-phosphate dehydrogenase | FCU55_09510 | Not Available | Positive | 1989444 - 1990949 | 56797.9 |
| hypothetical protein | FCU55_09515 | Not Available | Negative | 1991003 - 1991608 | 23592.4 |
| hypothetical protein | FCU55_09520 | Not Available | Negative | 1991611 - 1992378 | 29489.5 |
| psts family phosphate abc transporter substrate-binding protein | FCU55_09525 | Not Available | Negative | 1992481 - 1993989 | 56401.4 |
| glycogen phosphorylase | FCU55_09530 | Not Available | Negative | 1994114 - 1996561 | 93232.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





