Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated heat shock protein hsp15 | FCU55_09380 | Not Available | Positive | 1958900 - 1959301 | 15524.8 |
| hsp33 family molecular chaperone hslo | FCU55_09385 | Not Available | Positive | 1959326 - 1960204 | 32536.3 |
| is200/is605 family element transposase accessory protein tnpb | FCU55_09390 | Not Available | Negative | 1960327 - 1961535 | 45630.9 |
| duf4153 domain-containing protein | FCU55_09400 | Not Available | Negative | 1961838 - 1963562 | 64547.0 |
| phosphoenolpyruvate carboxykinase (atp) | FCU55_09405 | Not Available | Positive | 1963940 - 1965562 | 59646.7 |
| two-component system sensor histidine kinase envz | FCU55_09410 | Not Available | Negative | 1965639 - 1966991 | 50365.1 |
| two-component system response regulator ompr | FCU55_09415 | Not Available | Negative | 1966988 - 1967707 | 27355.3 |
| transcription elongation factor greb | FCU55_09420 | Not Available | Positive | 1967899 - 1968411 | 19958.9 |
| rna-binding transcriptional accessory protein | FCU55_09425 | Not Available | Positive | 1968508 - 1970829 | 85146.8 |
| ferrous iron transporter a | FCU55_09430 | Not Available | Positive | 1971267 - 1971494 | 8371.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





