Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter tsga | FCU55_09225 | Not Available | Positive | 1927450 - 1928631 | 43169.0 |
| nitrite reductase large subunit | FCU55_09230 | Not Available | Positive | 1928893 - 1931436 | 93112.6 |
| nitrite reductase small subunit nird | FCU55_09235 | Not Available | Positive | 1931433 - 1931759 | 12270.6 |
| nitrite transporter nirc | FCU55_09240 | Not Available | Positive | 1931886 - 1932692 | 28565.2 |
| uroporphyrinogen-iii c-methyltransferase | FCU55_09245 | Not Available | Positive | 1932711 - 1934084 | 49980.4 |
| duf4223 domain-containing protein | FCU55_09250 | Not Available | Positive | 1934336 - 1934503 | 5819.16 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | FCU55_09255 | Not Available | Negative | 1934611 - 1935696 | 38600.9 |
| hypothetical protein | FCU55_09260 | Not Available | Negative | 1935708 - 1937012 | 46493.3 |
| duf2620 domain-containing protein | FCU55_09265 | Not Available | Negative | 1937024 - 1937377 | 12479.5 |
| phosphotriesterase-related protein | FCU55_09270 | Not Available | Negative | 1937388 - 1938266 | 32819.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





