Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU55_09025 | Not Available | Negative | 1893356 - 1894516 | 40784.6 |
| autotransporter adhesin ag43 | FCU55_09030 | Not Available | Negative | 1894578 - 1897700 | 107066.0 |
| gtpase family protein | FCU55_09035 | Not Available | Negative | 1898034 - 1898906 | 32455.8 |
| hypothetical protein | FCU55_09040 | Not Available | Negative | 1899202 - 1899396 | 7801.18 |
| hypothetical protein | FCU55_09045 | Not Available | Positive | 1899822 - 1900043 | 8214.2 |
| duf3987 domain-containing protein | FCU55_09050 | Not Available | Positive | 1900238 - 1901728 | 56194.0 |
| hypothetical protein | FCU55_09055 | Not Available | Negative | 1901849 - 1902421 | 22241.3 |
| alpa family transcriptional regulator | FCU55_09060 | Not Available | Negative | 1902507 - 1902767 | 9964.14 |
| hypothetical protein | FCU55_09065 | Not Available | Negative | 1902710 - 1902916 | 7826.55 |
| hemolysin activation protein | FCU55_09070 | Not Available | Positive | 1903661 - 1903810 | 5723.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





