Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU55_08970 | Not Available | Negative | 1888246 - 1888734 | 18003.3 |
| toxin | FCU55_08975 | Not Available | Negative | 1888731 - 1889108 | 14057.9 |
| type iv toxin-antitoxin system yeeu family antitoxin | FCU55_08980 | Not Available | Negative | 1889197 - 1889565 | 13561.1 |
| antitoxin of toxin-antitoxin stability system | FCU55_08985 | Not Available | Negative | 1889615 - 1890259 | 25011.2 |
| duf987 domain-containing protein | FCU55_08990 | Not Available | Negative | 1890278 - 1890499 | 8441.23 |
| dna repair protein radc | FCU55_08995 | Not Available | Negative | 1890562 - 1891038 | 17674.4 |
| antirestriction protein | FCU55_09000 | Not Available | Negative | 1891054 - 1891539 | 18156.4 |
| duf945 domain-containing protein | FCU55_09005 | Not Available | Negative | 1891594 - 1892412 | 31143.3 |
| duf905 domain-containing protein | FCU55_09015 | Not Available | Negative | 1892513 - 1892746 | 8738.36 |
| hypothetical protein | FCU55_09020 | Not Available | Negative | 1892825 - 1893280 | 16903.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





