Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptg | FCU55_08800 | Not Available | Positive | 1845994 - 1847073 | 39688.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | FCU55_08805 | Not Available | Negative | 1847108 - 1848280 | 41727.1 |
| acyl carrier protein | FCU55_08810 | Not Available | Negative | 1848280 - 1848528 | 9417.69 |
| nad-dependent epimerase/dehydratase family protein | FCU55_08815 | Not Available | Negative | 1848560 - 1849474 | 33522.2 |
| fatty acyl-amp ligase | FCU55_08820 | Not Available | Negative | 1849471 - 1851201 | 63601.1 |
| n-acetyltransferase | FCU55_08825 | Not Available | Positive | 1851563 - 1852705 | 43466.8 |
| transcriptional regulator glcc | FCU55_08830 | Not Available | Negative | 1852712 - 1853476 | 28856.9 |
| glycolate oxidase subunit glcd | FCU55_08835 | Not Available | Positive | 1853727 - 1855226 | 53829.0 |
| glycolate oxidase subunit glce | FCU55_08840 | Not Available | Positive | 1855226 - 1856278 | 38357.3 |
| glycolate oxidase subunit glcf | FCU55_08845 | Not Available | Positive | 1856289 - 1857512 | 45116.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





