Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | FCU55_08700 | Not Available | Positive | 1826854 - 1827741 | 32592.6 |
| duf2623 domain-containing protein | FCU55_08705 | Not Available | Positive | 1827860 - 1828147 | 10946.1 |
| hydrogenase 2 small subunit | FCU55_08710 | Not Available | Positive | 1828336 - 1829454 | 39682.3 |
| hydrogenase 2 operon protein hyba | FCU55_08715 | Not Available | Positive | 1829457 - 1830443 | 35944.9 |
| ni/fe-hydrogenase cytochrome b subunit | FCU55_08720 | Not Available | Positive | 1830433 - 1831611 | 43604.6 |
| hydrogenase 2 large subunit | FCU55_08725 | Not Available | Positive | 1831608 - 1833311 | 62494.6 |
| hyad/hybd family hydrogenase maturation endopeptidase | FCU55_08730 | Not Available | Positive | 1833311 - 1833805 | 17739.8 |
| hydrogenase-2 assembly chaperone | FCU55_08735 | Not Available | Positive | 1833798 - 1834286 | 17964.6 |
| hydrogenase maturation nickel metallochaperone hypa | FCU55_08740 | Not Available | Positive | 1834279 - 1834620 | 12698.1 |
| hydrogenase maturation factor hybg | FCU55_08745 | Not Available | Positive | 1834633 - 1834881 | 8808.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





