Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease subunit | FCU55_08600 | Not Available | Negative | 1805957 - 1807261 | 46165.5 |
| trap transporter small permease | FCU55_08605 | Not Available | Negative | 1807272 - 1807754 | 18192.2 |
| trap transporter substrate-binding protein | FCU55_08610 | Not Available | Negative | 1807796 - 1808779 | 36214.6 |
| ldh family oxidoreductase | FCU55_08615 | Not Available | Negative | 1808852 - 1809862 | 36043.5 |
| zinc-binding alcohol dehydrogenase family protein | FCU55_08620 | Not Available | Negative | 1809873 - 1810889 | 36863.2 |
| mannitol dehydrogenase family protein | FCU55_08625 | Not Available | Negative | 1810886 - 1812358 | 54395.6 |
| fcd domain-containing protein | FCU55_08630 | Not Available | Negative | 1812681 - 1813430 | 29181.9 |
| ygiq family radical sam protein | FCU55_08635 | Not Available | Positive | 1813682 - 1815901 | 83533.5 |
| lipoprotein yqhh | FCU55_08640 | Not Available | Negative | 1815943 - 1816200 | 9527.61 |
| duf3828 domain-containing protein | FCU55_08645 | Not Available | Negative | 1816251 - 1817177 | 34998.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





