Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin ibse | FCU55_08395 | Not Available | Negative | 1762412 - 1762471 | 2241.07 |
| flotillin family protein | FCU55_08400 | Not Available | Negative | 1762711 - 1764372 | 60711.1 |
| duf1449 family protein | FCU55_08405 | Not Available | Negative | 1764399 - 1765028 | 23028.3 |
| cell surface composition regulator glgs | FCU55_08410 | Not Available | Positive | 1765298 - 1765498 | 7922.34 |
| accessory factor ubik family protein | FCU55_08415 | Not Available | Negative | 1765533 - 1765832 | 11397.8 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | FCU55_08420 | Not Available | Positive | 1766206 - 1766859 | 23340.8 |
| pilus assembly protein | FCU55_08425 | Not Available | Negative | 1766913 - 1767962 | 39385.3 |
| fimbrial assembly protein | FCU55_08430 | Not Available | Negative | 1767959 - 1768699 | 27369.4 |
| fimbrial biogenesis outer membrane usher protein | FCU55_08435 | Not Available | Negative | 1768715 - 1771237 | 93418.1 |
| fimbrial-like protein | FCU55_08440 | Not Available | Negative | 1771322 - 1771885 | 19742.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





