Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l(+)-tartrate dehydratase subunit alpha | FCU55_08345 | Not Available | Negative | 1750338 - 1751249 | 32664.4 |
| dna-binding transcriptional activator ttdr | FCU55_08350 | Not Available | Positive | 1751456 - 1752388 | 35286.6 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | FCU55_08355 | Not Available | Negative | 1752401 - 1753018 | 22194.7 |
| bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | FCU55_08360 | Not Available | Positive | 1753123 - 1753491 | 13620.2 |
| undecaprenyl-diphosphate phosphatase | FCU55_08365 | Not Available | Positive | 1753582 - 1754403 | 29801.7 |
| fused trna nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase cca | FCU55_08370 | Not Available | Negative | 1754483 - 1755721 | 46515.8 |
| sh3 domain-containing protein | FCU55_08375 | Not Available | Negative | 1755785 - 1756405 | 23176.9 |
| inorganic triphosphatase | FCU55_08380 | Not Available | Positive | 1756647 - 1757948 | 48619.0 |
| bifunctional | FCU55_08385 | Not Available | Positive | 1757971 - 1760811 | 108321.0 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | FCU55_08390 | Not Available | Positive | 1760859 - 1762292 | 51038.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





