Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent 2,4-dienoyl-coa reductase | FCU55_08240 | Not Available | Negative | 1724277 - 1726295 | 72675.6 |
| alpha-glucosidase | FCU55_08245 | Not Available | Negative | 1726521 - 1728872 | 88574.0 |
| protein ygjj | FCU55_08250 | Not Available | Negative | 1728889 - 1729959 | 40289.8 |
| amino acid permease | FCU55_08255 | Not Available | Negative | 1730093 - 1731526 | 52175.7 |
| beta-galactosidase subunit beta | FCU55_08260 | Not Available | Negative | 1731589 - 1732038 | 17457.6 |
| beta-galactosidase subunit alpha | FCU55_08265 | Not Available | Negative | 1732035 - 1735127 | 117860.0 |
| transcriptional regulator ebgr | FCU55_08270 | Not Available | Negative | 1735311 - 1736294 | 36252.6 |
| pp_01646 | FCU55_08275 | Not Available | Positive | 1736513 - 1736845 | Not Available |
| putrescine aminotransferase | FCU55_08280 | Not Available | Negative | 1736887 - 1738377 | 53855.5 |
| methyl-accepting chemotaxis protein | FCU55_08285 | Not Available | Positive | 1738684 - 1740204 | 55039.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





