Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| altronate dehydratase | FCU55_08190 | Not Available | Positive | 1714721 - 1716208 | 54041.1 |
| ygjv family protein | FCU55_08195 | Not Available | Positive | 1716291 - 1716842 | 20594.8 |
| serine/threonine transporter sstt | FCU55_08200 | Not Available | Negative | 1716846 - 1718090 | 43489.4 |
| terc family membrane protein alx | FCU55_08205 | Not Available | Negative | 1718414 - 1719379 | 35983.2 |
| gfo/idh/moca family oxidoreductase | FCU55_08210 | Not Available | Negative | 1719662 - 1720648 | 36349.4 |
| vancomycin high temperature exclusion protein | FCU55_08215 | Not Available | Negative | 1720727 - 1721419 | 25540.3 |
| m48 family metallopeptidase | FCU55_08220 | Not Available | Negative | 1721496 - 1721999 | 19456.6 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | FCU55_08225 | Not Available | Positive | 1722084 - 1723220 | 42340.9 |
| mrna interferase higb | FCU55_08230 | Not Available | Positive | 1723505 - 1723819 | 12103.7 |
| type ii toxin-antitoxin system antitoxin higa | FCU55_08235 | Not Available | Positive | 1723816 - 1724232 | 15024.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





