Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU55_07615 | Not Available | Positive | 1601759 - 1602052 | 11048.4 |
| purine ribonucleoside efflux pump nepi | FCU55_07620 | Not Available | Negative | 1602093 - 1603283 | 41878.5 |
| hypothetical protein | FCU55_07625 | Not Available | Negative | 1603367 - 1603558 | 7398.28 |
| type ii toxin-antitoxin system rele/pare family toxin | FCU55_07630 | Not Available | Positive | 1603517 - 1603870 | 13512.3 |
| dna-binding transcriptional regulator | FCU55_07635 | Not Available | Positive | 1603854 - 1604177 | 11708.3 |
| duf1198 domain-containing protein | FCU55_07640 | Not Available | Negative | 1604293 - 1604745 | 17220.1 |
| ncs2 family permease | FCU55_07645 | Not Available | Negative | 1604798 - 1606132 | 46970.6 |
| adenine deaminase | FCU55_07650 | Not Available | Positive | 1606307 - 1608073 | 63776.2 |
| hexose-6-phosphate:phosphate antiporter | FCU55_07655 | Not Available | Negative | 1608120 - 1609511 | 50608.6 |
| mfs transporter family glucose-6-phosphate receptor uhpc | FCU55_07660 | Not Available | Negative | 1609649 - 1610968 | 48249.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





